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Currently, readAheadMax is a non-configurable parameter for fuse users, set by default to conf.Chunk.BlockSize * 8, typically 32MB. This isn't sufficient for low-concurrency read requests. I inten…
ddrid updated
1 month ago
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Hi all,
Thanks for developing this very interesting and useful package.
Am I correct in assuming there is no compatibility with demultiplexing cell hash data with TCR repertoire analysis (10x) …
CAC13 updated
2 years ago
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See https://forum.image.sc/t/a-couple-of-queries-about-omero-iviewer/36144
"In iviewer, is there any way of zooming in/out of the image using the microscope objective magnifications) I get a…
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Hi,
I specified the standard output folder of the 10x SpaCET Ranger (with the "filtered_feature_bc_matrix" and "spatial" folders) in visiumPath.
As with the dataset in the tutorial,
The "filtered_…
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While trying out the file API, i noticed that file reads are incredibly slow.
I'm loading a binary file with ~60MB in size, this takes ~2.5s with `readBinaryFile`.
For comparison, loading the same …
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From the vignette and by running the SCnorm command on 10x data that is heavily zero-inflated (sequenced to 85-90% saturation), i ran into the