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Hi,
I have tried to run the **tutorial dataset (SARS-CoV-2)** with the command mentioned on the webpage,
https://cbg-ethz.github.io/V-pipe/tutorial/sars-cov2/
However, after running successfu…
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While testing on a genome of interest hm.batchB3.haplomerger does not produce a correct output and in the _B3.haploMerger.log I get the following error
HM_haploMerger.pl line 833.
Use of uninitia…
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https://github.com/bio4j/gsoc14/wiki/integrate-sequence-data-into-bio4j
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### Version
1
### DataCap Applicant
Guilin Yitu Network Technology Co., Ltd.
### Project ID
01
### Data Owner Name
ENCODE Data Coordinating Center
### Data Owner Country/Region
United States
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_WARNING: long post below. I'm hoping to help us build a shared conceptual framework to guide ongoing API design, and given the underlying complexity and the number of different priors, don't know how…
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@reedacartwright and I wanted to start a conversation about possibly porting the bash portions of SISRS to Python. We both feel this would make it easier to maintain in the long run, but the work to d…
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Most OBOs are CC-BY, Wikidata requires CC-0. Some ontologies have apparently granted Wikidata permission to redistribute part or all of their ontology.
We want to make sure this is streamlined with a…
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When I excuted TCGAanalyze_DEA(), this error occurred:
```
Error in getBM(attributes = attributes, filters = c("ensembl_gene_id"), :
Invalid attribute(s): entrezgene
Please use the function…
ghost updated
2 years ago
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We select a single representative genes for groups of alternative allele genes. These groups are based on the upstream `alt_allele` table, which provides a mapping between `gene_id`s and `alt_allele_g…
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Thank you for developing the tool. I am having an issue running it. Below is the command I ran with docker.
`docker run -d -v /media/Data_1/tianrm/projects/plasmid_identification/4/testing/plasmido…