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Hi, when I check the pepatac log, I find this command: `bedtools intersect -a /data3/01.projects/GROUP01043/10.ATAC_seq_test/poj5/pepatac/mas1/peak_calling_mm10/mas1_peaks_normalized.narrowPeak -b /da…
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Hi, I used your pipeline to analyze my own data. I have a problem that why you used all peaks to run Cicero rather than the output peak list from the function FindNode?
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# Issue
In timsTOF data we sometimes see m/z peaks that have a leading flank and do not have lower intensity peaks on both sides of the peak:
, but have gotten stuck at the "Caching data to disk" section of the "Atlas-level integration" [tutorial](https://mira-mu…
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I am trying to evaluate features such as AP1_amp, AP2_amp, AP1_peak, AP2_peak and seem to be getting incorrect (unexpected) values. I have attached a sample data file.
[data_Brian1_strong_depol_70.0.…
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- [ ] 1. Gino
https://www.wowhead.com/npc=29432/gino#ends
must appears after some quest must ba completed and starts
https://www.wowhead.com/quest=12823/a-flawless-plan#comments
- [ ] 2. Thorim
…
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Following this post (https://support.bioconductor.org/p/106565/), is it possible to call peaks on a regular 2D matrix in R using yamss? If so, how would one go about that?
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Some peaks may be the first isotope an already identified peak. It would be 1.003355 greater than a previous peak (e.g. 111.0743 is the first isotope of 110.0713 from H a
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Hi,
I am trying to run hichipper in python 2.7 and I getting the error bellow. All R dependencies were re-installed. Any idea of what might be happening?
Thanks,
Ana
Error: The requested file (h…