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Create Input_to_selection module to be able to add the selections plus datahubs to the system. This has to have two modes:
1) automated mode: look for taxid+datahub rule to add the selection to pro…
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I'm trying to parse the GTDB r207 taxdump with [`taxopy`](https://github.com/apcamargo/taxopy) and I got the following error:
```python
taxdb = taxopy.TaxDb(taxdb_dir="gtdb-taxdump/R207")
```
``…
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I add a special row in Taxonomy table to handle taxonomy should not be NULL situation. Its ID is 1. Tax_id is 0. Tax_id column saves the taxonomy ID from [NCBI](https://www.ncbi.nlm.nih.gov/datasets/t…
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**Describe the bug**
Variables we use in composite step for Lifecycle: After are not resolved and step fails
**To Reproduce**
Some part of the story:
```
Lifecycle:
After:
Scope: STORY
Whe…
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Hi Sara,
I've been trying to build custom databases by following FastViFi Readme. Building databases for HCV and EBV were successful, however, building the hbv databases for k=18, k-22 were unsucce…
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Dear @vitkl
Thanks for developing PItools. I am first time usier of PItools and I was trying to fetch the interactions for Plasmodium from Intact and I encountered the following error:
```r
> …
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#### Details of the scenario you tried and the problem that is occurring
I'm trying to add managed properties, but SPSearchManagedProperty doesn't seem to accept anything into CrawledProperties. …
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Hello,
Thanks for the pretty tools so that we can analyze the ssc data for more directions.
Here erro infomations in : Rscript ./functions/taxa_counts.r on 75 lines:
s.mat = sparseMatrix(as.integ…
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From Jason:
Is the tool very specific for only the NCBI DB format?
Problem: is organism reliably identified in the headers of proteins?
Retool for Uniprot protein headers? These seem to always con…
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I'm a hobbyist and have been extensively using the tesla customer api to control my car and my powerwall.
it stopped working last night.
It looks like I can't use the new method unless I'm a tax-reg…