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sara-javadzadeh
/
FastViFi
Detect viral infection and integration sites on NGS input. Manuscript is in preparation.
GNU General Public License v3.0
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"run_kraken_vifi_pipeline.py" becomes a directory
#16
hiuchi
closed
23 hours ago
4
output interpretation HIV
#15
antoine4ucsd
closed
3 weeks ago
2
[E::bwa_idx_load_from_disk] fail to locate the index files
#14
v-mukhina
opened
3 months ago
7
error in run kraken_vifi_conainer.py using docker: subprocess.calledprocesserror returned non-zero exit status 1
#13
cubense
opened
7 months ago
8
kraken datasets unavailable
#12
ugh-astya
closed
10 months ago
12
Update README.md – grammatical issue
#11
mrzResearchArena
opened
1 year ago
1
Error on test code (however, using singularity)
#10
gailrosen
opened
1 year ago
10
Failing to build custom database for HBV
#9
wskang1202
opened
1 year ago
18
Use the whole exome sequencing?
#8
xiasijian
closed
1 year ago
7
Do it support hg38 genome?
#7
xiasijian
closed
1 year ago
6
human reference file not existent
#6
aflocon
closed
1 year ago
3
chmod folder access error
#5
bhagesh-codebeast
opened
2 years ago
0
ViFi vs FastVifi
#4
pintoa1-mskcc
opened
2 years ago
0
How to select FASTAs for building new viral references?
#3
pintoa1-mskcc
opened
2 years ago
6
ViFi pipeline has warning messages and test dataset can't generate expected results
#2
shengzhulst
closed
2 years ago
3
The ViFi step 4|5 google link point to error
#1
shengzhulst
closed
2 years ago
2