-
From the vignette and by running the SCnorm command on 10x data that is heavily zero-inflated (sequenced to 85-90% saturation), i ran into the
-
Dear Velocyto team,
I have a question about running velocyto on eight 10x samples. Since 10X pipeline gives bam file for each sample, I can run velocyto on each bam file one by one and generate eig…
-
Hi
I have 10X chromiun samples and I tried to use command "run10X"
In your homepage, when running on 10X chromium sample, velocyto need file path to the cellranger output folders
and give an exa…
-
Currently have 10X studies processed. Need to write code to generate the AIRR Cell format.
-
Project UUID: 008e40e8-66ae-43bb-951c-c073a2fa6774
Project Title: HDCA project: single cell transcriptomics
Project Short Name: HDCA-Sweden-10x
Submission UUID: 071fc37f-1a01-4cf7-a6f5-2662c42c12b…
-
While trying out the file API, i noticed that file reads are incredibly slow.
I'm loading a binary file with ~60MB in size, this takes ~2.5s with `readBinaryFile`.
For comparison, loading the same …
-
Currently, readAheadMax is a non-configurable parameter for fuse users, set by default to conf.Chunk.BlockSize * 8, typically 32MB. This isn't sufficient for low-concurrency read requests. I inten…
ddrid updated
1 month ago
-
So nudging an integer would move in increments of 10, nudging a float would move in increments of 1.0... Someone suggested this on the forum.
-
I've been timing the C implementation versus the rust implementation and I generally notice about a factor of 8-10x difference.
Do you know offhand any obvious performance tradeoffs that were made in…
-
Hello,
Here is my configuration:
- MCU : RP2040
- SPI speed: 16MHz
- Periodic write size: ~80 bytes
I'm using the `embedded-sdmmc-rs` library (version 0.5.0 because I can't get `SpiDevice` t…