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https://mp.weixin.qq.com/s/pGyn2eO2YFGjLHsd41dt6w
ixxmu updated
2 years ago
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Hi Anvi'o team,
I am trying to perform some comparative genomics (published genomes/MAGs) using anvio. My pipeline is as follows
1. Download draft genomes/MAGs from various archives.
2. Reform…
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https://mp.weixin.qq.com/s/ZCOoeQU6ysK9G8apTnfjvQ
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/vDPc8tsPcEy5b3j-cPLtIQ
ixxmu updated
2 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/PavlidisLab/gemma.R
Confirm the following by edit…
yavyx updated
2 years ago
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I installed nvm by cloning the repo to ~/.nvm and adding the lines specified in the README to my bashrc.
I did this because I need to build a project (https://github.com/aws/amazon-genomics-cli) th…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/GenEpi-GenPhySE/epistack
Confirm the following by…
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if pixels are upper-triangular, then dividing by 2 should not be required, i.e. we should remove:
> [covs = covs / 2](
https://github.com/open2c/cooltools/blob/7bb960848f23dc187078d5c84287d3d073adb9…
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Using the [pre-compiled version](https://github.com/haowenz/chromap/issues/4#issuecomment-865022963_) I get the following error:
```
./chromap --preset hic -x test.index -r ref.fa -1 r1.fq -2 r2…
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Meeting note on Feb 26. 2021
1. DNA footprinting pipeline(shared by Shannon): http://www.regulatory-genomics.org/hint/introduction/
2. DNA footprinting paper (shared by Shannon): https://genomebiolo…