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The ModuleDefinition, Module, and MapsTo classes from SBOL 2 do not yet have an equivalent representation in SBOL Visual.
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/imkeller/gscreend
Confirm the following by editin…
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Hello Luca,
Is there any way to have longer allele sequences in the file Alleles_frequency_table_around_cut_site_for_*.txt?
It would be useful for the analysis of HDR events that are located far…
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As typical gRNA length is 20nt I wonder why 30nt are needed and how to define those nt (as I can have gRNA and 10 nt before or gRNA and 20nt after)
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# SEP V004: New Glyph Collection
| SEP | |
| --- | --- |
| **Authors** | Jacob Beal (jakebeal@ieee.org) |
| **Editor** | |
| **Type** | Specification |
| **SBOL Visual Version** | 1.1 |
| *…
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Include examples of config components. For gRNA, acceptable names include: B2M, B2M.14.3, B2M-14-3, B2M_14-3 (can use '-', '_', or '.' as delimiters.
Other parts with examples, Run names, on-target…
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We have not yet determined what it means when an arrow has multiple sources or multiple sinks.
The fundamental ambiguity in drawings at present is that this is currently used to mean two things:
1. …
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Method currently uses Cas9 parameters but should be configurable for Cpf1 or TALENs or other nucleases. Using the current system, develop a standard configuration input to represent different nuclease…
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I am creating a genome wide pgRNA knockdown screen and I really want to get Elevation scores for my gRNAs. At the moment I am able to get the 1st test in 'Debugging dsNickFury (invoke using python 3)…
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Consider adding the following to the report:
- [completed] karyogram like figure to show genomic distribution of target sites (on/off)
- [completed] Compare probable off-target sites against ran…