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I'm tring to use xcp_d, but it reports error continuely for my fmriprep data which contains t1w structural image only.
version: V0.6
command: demo simple command
process detail:
collected dat…
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We would like to know how easily SAM can be fine-tuned for fully automatic segmentation (i.e. prompting with the whole image as a bbox instead of prompting with a ROI of interest).
The perfect pret…
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Hi dear Hippunfold expert:
I tried to use the myelin map function in hippunfold. But myelin on DG have many zero vertices. I used HCP preprocessed T1w and T2w image, I check the image and ensure ther…
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## Summary
The errors is reported that the work connect could not find the lh.cortical_thickness_corr and rh.cortical_thickness_corr in the HCP dataset.
## Additional details
- xcp_d version: 0…
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Hi,
I'm reading your NLLS fitting for myelin water imaging, and feel it is very useful. However, I cannot get access to Bruker_QSM folder, which made me impossible to read codes for k-space reconst…
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https://github.com/axondeepseg/sam_myelin_seg_TEM/blob/415b98a0142b5dff71205749b641bc1e96638c84/scripts/bids_utils.py#L70-L87
Order in which samples are loaded should be shuffled.
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## Environment
**TensorRT docker version version**: 22.08
**TensorRT version**: 8.4.2.
**NVIDIA GPU**:NVIDIA GeForce GTX 1650 Ti GPU
**Memory**: 15.4 GiB
**NVIDIA Driver Version**:52…
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Experimenting on an RTX 2060 and deploying the DSVT module only shows mediocre improvement versus python (~.05 % speedup) despite doing input statistic study (custom data) and narrowly adjusting the d…
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The exact way to process batches is described at the end of this notebook: https://github.com/facebookresearch/segment-anything/blob/main/notebooks/predictor_example.ipynb
Both the images and the p…
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It appears that MHA is optimized using the Myelin backend. I would like to know if Myelin optimization is faster than the provided FusedMHA plugin. Also, when deploying MHA, do you recommend using the…