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For some types of analysis, for example trio, its common practice for our clinicians to base their analysis not on gene panels but on phenotypes. This because in trio analysis are very custom and ofte…
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目前 phenotype data 条目下还没有看到？ 有在其他地方实现 subtype 的对比分析么？@lishensuo
另外已有 pancancer_conserved_immune_subtype 的数据
tcga_subtypes 的不知道也能否利用
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I want to fit one exposure at a time against the residuals of the outcome that has been adjusted for the other exposures.
When the p-value threshold is changed in mv_residual to include more SNPs…
MaVdb updated
2 weeks ago
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cdc7-24, cdc14-118, and sid1-239. All these mutants are tempera-
ture sensitive and display sid phenotypes at 36 (Nasmyth and Nurse 1981; Balasubramanian et al. 1998).
- [ ] cdc7-24 not annotate…
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Hi @kimrutherford when you get chance could you do a query on an old database (anything > say 10 days ago)
and provide me with the list of genes annotated to
"normal chromatin organizat…
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### Description
Breeders of long-lived species will often need to navigate dead/missing germplasm positions when they phenotype. It is important to include placeholders for positions while data colle…
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Hi,
This is something we briefly discussed earlier.
We are trying to create a single manhatten plot by combing .gz files of the sumstats obtained from 15 different phenotypes.
What I'm currently …
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after loading TCGA data, I found that row.names(phenotype) is different from the columns "sample_name" "alt_sample_name".
the row.names(phenotype) is identical with colnames(expr).
I tend to believe…
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I am trying to run PhenotypeDiagnostics and it keeps giving me this error. I used CodelistGenerator to create a codelist and then CohortConstructor::conceptCohort to create a cohort and then ran Pheno…