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Hello!
I’m looking to do some analyses regarding heritability (h2) at single-variants overlaying some genetic features (more than annotation enrichment via LDSC, for example). Is there some way to ha…
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hi,
I have encountered a problem and had no idea why this happen.
Calling ./mtag.py \
--p-name pval \
--maf-min 0 \
--stream-stdout \
--n-min 0.0 \
--sumstats diabetes_new2.tsv,scz_new2.ts…
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Hello, I have a question about a warning I've been seeing when running EPIC.
When running EPIC, I often get the following warning from a cholesky decomposition step:
1: In chol.default(R, pivot = …
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Hi Luke,
I have successfully created the dataset, now I can see they are in the project folder in both csv and parquest format (data-kimo). Thank you for the help and patience!
But it seems the data…
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HI GCTA developer,
Thanks for the great tool! I ran gcta --reml on UKB data with 64 cores and 512G memory and got the following error:
> Accepted options:
--reml
--grm all ###all.grm.bin is …
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I received this error after creating a cluster, running jobs with it for ~5 hours, and then trying to exit out of that process.
This resulted in having to delete all the instances for the cluster m…
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Hello,
I would like to produce h5 files for UKB pre-training as done in your method. However, I encounter memory problems while generating it.
Would you have advices on a specific process you foll…
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Hi! Thanks for using the PGS Catalog calculator (`pgsc_calc`).
If you need help with setting up the calculator, configuration options, or have questions about polygenic risk scores generally, the …
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> exp_dat
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Hi, please see below. Thank you for your team
failed
exposure_data
zznx updated
4 months ago