jianyangqt gcta issues - Githubissues

jianyangqt / gcta

GCTA software

GNU General Public License v3.0

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issues

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zsh: bad CPU type in executable: ./gcta64

#84 FrederickGri opened 2 weeks ago
1
Wrong filtering due to internal allele frequencies computation when using fastGWA

#83 SoCadiou opened 3 weeks ago
3
Problems with mtCOJO

#82 Zhangzzzzzy opened 4 weeks ago
1
Inquiry about the LD window size setting in the GSMR via GCTA tool

#81 laleoarrow closed 1 month ago
2
GCTB Issue

#80 eromic96 opened 1 month ago
1
--fastGWA-mlm-binary: segmentation fault at sparse grm reading step

#79 WeiCSong opened 1 month ago
1
format error in the input file, --fastBAT gene-set GWAS,

#78 wangxu1990 opened 2 months ago
3
Can this be built with OpenBLAS instead of the proprietary MKL?

#77 rekado opened 2 months ago
2
feat:add vif threshold param

#76 Taichidasheen opened 2 months ago
0
Remove one of the colinearity conditions which is not suitable for WGS

#75 chundruv opened 3 months ago
0
Forcing fastgwa to run MLM if heritability is not significant

#74 chenpunk closed 3 months ago
5
How to get the G-matrix with haploid data

#73 YouxinZhao opened 4 months ago
1
Error: the V matrix is not invertible.

#72 AmandaHWChong opened 4 months ago
9
Error: XtWX is not invertible.

#71 AmandaHWChong closed 4 months ago
3
Error: invalid sample size in line

#70 anafyp opened 5 months ago
1
Issue reading bgen index file

#69 chenpunk closed 5 months ago
1
Input multiple .sample files

#68 chenpunk closed 5 months ago
1
GRM matrix rows are too large for fastGWAsglmm to run.

#67 labxpub closed 5 months ago
6
Estimating the genetic variance (Vg) by fastGWA-REML (grid search) no results for a long time

#66 DonaldSandoz2000 closed 6 months ago
1
No results obtained by fastGWA-GLMM

#65 labxpub closed 6 months ago
0
Runtimes are grossly out of line with the article

#64 labxpub closed 6 months ago
2
sample_subset is not in strictly increasing order

#63 ZhangZhenYang-zzy closed 6 months ago
1
Error: invalid option "--grm-sparse".

#62 zengjian0101 closed 6 months ago
1
Error: the format of file [gsmr_exposure.txt] is incorrect, line 1.

#61 umbrellaling opened 7 months ago
1
Error: there are too many SNPs that have large difference in allele frequency

#60 shreya2031 opened 7 months ago
1
LAPACK API change

#59 outpaddling opened 7 months ago
0
how LD score is computed for SNPs falling within two adjacent segments

#58 gsgarlata opened 8 months ago
0
Error: the variance-covariance matrix of bxy is not invertible.

#57 shreya2031 opened 8 months ago
3
Pre-computed Information For coJo

#56 GHawkes93 opened 9 months ago
0
phenotype file not found in fastGWA

#55 Wenxi-Zhang closed 10 months ago
1
What should input files look like?

#54 sanjaynagi closed 11 months ago
4
Error in mtCOJO: there are too many SNPs that have large difference in allele frequency

#53 statarat opened 11 months ago
7
Getting nan values for bC bC_se bC_pval in mtCOJO results

#52 Mahantesh-Biradar opened 11 months ago
8
Order of --cojo-slct

#51 catheriz opened 12 months ago
0
Error: XtWX is not invertible.

#50 lisongmiller closed 6 months ago
2
Feature: change maximum number of SNPs for gene-based tests

#49 jhchung opened 1 year ago
0
Add option to change maximum number of SNPs in gbat tests

#48 jhchung opened 1 year ago
0
Segmentation fault (core dumped) during fastGWA-GLMM

#47 lawspread closed 6 months ago
3
BIVARIATE OUTPUT

#46 vmartineuchilecl opened 1 year ago
0
Request – add option for user-specified trait variance for COJO

#45 Sodbo opened 1 year ago
0
Can't converge – hit the upper limit

#44 jhylwq123 closed 1 year ago
1
Do not generate a random seed when one is specified via the command line

#43 HippocampusGirl closed 1 year ago
1
Fix build with gcc-13

#42 HippocampusGirl opened 1 year ago
0
Merged file prior to REML solver

#41 dadekale closed 1 year ago
1
Error: rs... is a fixed SNP!

#40 amanouchehrinia closed 1 year ago
1
Issues installing GCTA on mac

#39 anne0113 closed 1 year ago
3
input error: invalid option for "--bgen" or "--mbgen"

#38 zqHealth closed 6 months ago
3
CMake error during intall GCTA in ubuntu 20.04 via gcta_build_steps_linux.sh

#37 ML1990-Lab opened 1 year ago
2
std::bad_alloc in REML analysis

#36 WeiCSong opened 1 year ago
8
GCTA grm output not positive semi-definite

#35 willright28 closed 1 year ago
1