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## Summary
When running reconstruction using qsiprep for pyafq_tractography it seems that the custom config (given by --recon-spec) is not read correctly.
## Additional details
- QSIPrep version:…
jk619 updated
3 months ago
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Dear @rhancockn, @neurosutton, @bpinsard
@Remi-Gau and I are trying to get the HCPPipelines bids-app updated and tested again :)
We are currently running into the problem that the test data is …
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So there is a command line tool which satisfies bids-apps interface and then listed on https://bids-apps.neuroimaging.io/apps/ with docker images built and then we would get also absorb it into https:…
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Over in bids-standard/pybids#357, we've been having a small discussion over the precedence of metadata when JSON sidecars and NIfTI disagree. Specifically the question was whether to take the 4th pixd…
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Why would we do that? to gain visibility
More info on BIDS App --> https://bids-apps.neuroimaging.io/
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# The Positron Emission Tomography Brain imaging Data structure (PET-BIDS) extension: A new standard for sharing PET data
***By Melanie Ganz, Neurobiology Research Unit, Rigshospital, Copenhagen, Denm…
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### Your idea
### Related to
Related to https://github.com/openjournals/joss-reviews/issues/7061
### Rationale
#### Clarify input data requirements
I'm unclear on what is necessary / requ…
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Currently the circle ci workflow is what looks like a hello world.
Given that we display the result of this workflow on the bids app dash, it would be better for users if this information reflected…
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ATM it is whooping 1.13GB so takes time to download it. And then together with #24 it just becomes somewhat disappointing to wait to just get no sensible output.
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Hello
I am new to BIDS and plan to update all my custom spm scripts to run on BIDS data.
BIDS-Apps/SPM seems to be a first step in this direction, but running on some of my data (one subject, one …