-
**Describe the bug**
Hi! I am following the pycistopic tutorial here. https://pycistopic.readthedocs.io/en/latest/notebooks/human_cerebellum.html. It shows a error ValueError: Fragment file ./temp/ag…
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Hi,
thank you for the useful tool! I just have one question on this part:
**3.pseudo-code for generation of bigwig files from a bed file
libSize=`cat sample1.bed|wc -l`
scale=15000000/($libSize*$S…
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### Description of the bug
Currently, the IGV reporting directory tries to keep all the resource files within it to make the directory self-contained. It does so through the `includeInputs` mechanism…
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```
What steps will reproduce the problem?
1.Install Bigwigs
2.Install EPGP
3.Kill a raid boss.
What is the expected output? What do you see instead? I expect once the boss
is dead, and I'm out of …
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I install this package by:
- R CMD INSTALL bigWig
but I get this error and can't install this package, could you help me ?
`Warning: invalid package ‘bigWig’
Error: ERROR: no packages specifi…
-
**Describe the bug**
Hi! I am following the pycistopic tutorial here. https://pycistopic.readthedocs.io/en/latest/notebooks/human_cerebellum.html. It shows an error ValueError: Fragment file ./temp/a…
-
Hello,
I was wondering if plotFingerprint supports bigwig input files?
The documentation mentions using bigwigs or indexed BAM files as input: https://deeptools.readthedocs.io/en/develop/conten…
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Is there any way to access bigWig/Bamfiles from perturbation experiments?
Thanks a lot for your time.
Cheers,
Pablo.
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Hey Bernardo!
Random question. When you predict across the dm3 genome, how do you save the outputs and then convert them to bigWig tracks that nicely match the STARR-seq bigWigs in magnitude? Maybe…
-
```
What steps will reproduce the problem?
1.Install Bigwigs
2.Install EPGP
3.Kill a raid boss.
What is the expected output? What do you see instead? I expect once the boss
is dead, and I'm out of …