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I have these ideas scattered about, I'm trying to collect them into one place. This issue is an attempt at a training course for a web application developer. I'm going to start using it as I mentor ne…
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It has historically been common to simplify the depiction of an entire gene, operon, or gene cluster as a single glyph that is equivalent in form to that of the current SBOL CDS glyph.
![image](https…
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**[The following two posts are my reply to /u/starspawn0's comment on the paper [*Language Modeling for Formal Mathematics*](https://arxiv.org/abs/2006.04757) by Christian Szegedy et al., posted on su…
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There are a number of short identifier-sized pieces of metadata that are used across many GA4GH products. For example:
* Reference sequence names
In SAM/BAM/CRAM, this is the `@SQ-SN` header f…
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# Brown Univ. Introduction to Bioconductor 2018, Period 1
## A comment on how to use the notebook
It is probably best to "clear" all cells at first. We will go through text, look
at the code…
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It would be nice to implement various algorithms for qualitative analysis of chemical reaction networks. So, this issue is for brainstorming:
1. What kind of qualitative analyses would you like to …
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We need examples of the types of experiments and queries which are going to be executed against `data-refinery` data.
These examples should include the perspectives from bioinformaticist, bench re…
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Hello,
Thanks for this helpful package. I'm trying to use this package to analyze for biological gene expression data. BWS method was suggested to be a powerful approach for non-parametric analysis…
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1. NumPy
2. Pandas
3. Scipy
4. matplotlib
5. Patsy
6. Sympy
7. Plotly
8. statsmodels
9. ADiPy
10. matalg27
11. mplstyler
12. Scikit-image
13. Scikit-learn
14. Gnuplot.py
15. NetworkX
1…
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I see. You are interested in the goddess of history, Mnemosyne, who is also the mother of the nine Muses. She is a very important figure in Greek mythology, as she represents the power of memory and r…