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The following opinion piece contains both references to host-pathogen data sources as well as a GloBI-like and CETAF Covid19 biodiversity knowledge hub-like proposal to make better use of museum speci…
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Attempted reharvesting of a pinned mosquito: https://biorepo.neonscience.org/portal/collections/individual/index.php?occid=959068
This mosquito has a parent sample that included all of the mosquito…
kyule updated
8 months ago
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Decision was made in collaboration with CMs that the preferred identifier structure would be:
1. newly created IGSN for each subsample's catalogNumber and occurrenceID
2. otherCatalogNumbers creat…
kyule updated
3 weeks ago
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We've decided it's outside of the biorepository scope to manage non-NEON collections that were collected at NEON sites. These needs to be removed.
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Here are two examples of samples for which one of the subsample identifications is being protected despite seemingly no differences in the published and raw names provided.
_Drapanocladus_
https:/…
kyule updated
3 months ago
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Manifest viewer has problems displaying samples that have double quotes within the output data (typically in remarks fields). Additional issues exist with NULL values being set to string functions.
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egbot updated
3 months ago
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Many DNA extracts are derived from vouchers where we also get that physical specimen voucher at the biorepository.
At least for the carabid beetles, most (and nearly all future) DNA extracts in htt…
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When taxon and taxon_published.... names differ because they are synonyms we should harvest the most up to date accepted name according to our thesaurus.
kyule updated
3 months ago
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Here is an example of a sample for which one of the subsample taxa is being protected. The taxon and taxon_published are the same, the only difference is how the scientific rank is being appreviated i…
kyule updated
3 months ago
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In order for the NEON folks to get at our taxonomy via the API, we need to update the API to additionally return an array of the associated NEON taxon codes (since tid to neon_code is a one to many re…