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Funannotate version
Funannotate galaxy australia V 1.8.15 galaxy4
**Describe the bug**
I'm promoting a functional reannotation using public gff files from NCBI. For this process I've conducted a …
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Hello,
I am not sure what this error output means, as I am not sure what/where the out.tbl file is, and am not aware of how to fix this.
If it helps, this code was run through Galaxy.
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Error occurs when trying to retrieve the tax ids from NCBI for adding taxonomic information to the 2 output tab delimited lists when running the get_dbcan_cazymes command on the St Andrews Kennedy Sup…
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In order to run METABOLIC-C I am using the flags -in-gn and -r. According to the instructions, I need to provide the path to the paired-end reads. I tested the command: 1) providing a path to the file…
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Hi @patriciatran and @ChaoLab,
I've recently re-installed METABOLIC using conda [https://github.com/AnantharamanLab/METABOLIC/issues/27] and `git clone https://github.com/AnantharamanLab/METABOLIC…
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when we use the funannotate annotate, there was an error message
(funannotate) [liuyuanchao@master01 /data/liuyuanchao/funannotate_test/Analysis/Volvariella_volvacea_V23]
$funannotate annotat…
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**Are you using the latest release?**
Using 1.8.15
**Describe the bug**
Several tests are failing (annotate, busco, rna-seq) using both the mamba installation and installing from source. clean, …
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(METABOLIC-v4) lizhihua@lizhihua-T640:/media/lizhihua/software/METABOLIC-v4/METABOLIC$ ./run_to_setup.sh
tar (child): Accessory_scripts.tgz: Cannot open: No such file or directory
tar (child): Erro…
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**Describe the bug**
When I used METABOLIC-C.pl , I met some bugs:
This is the **METABOLIC_log.log**:
[2022-10-30 19:50:08] The Prodigal annotation is running...
[2022-10-30 19:50:34] The Prodig…
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Describe the bug
No All_gene_collections_transcript_coverage.txt file is generated using metatranscriptome reads (metaT)
To Reproduce, see error:
Error:
[2022-03-29 23:40:53] Drawing element cyc…