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## Background
Currently there are multiple ways in which Variant ID and rsID are represented on the platform. Some examples are:
**1. OT Genetics widget**
https://ftp.ncbi.…
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As discussed when we migrated to the new XML format in #396, the new format includes a new structure as well as new terms for clinical classification (previously called clinical significance) for soma…
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The current variant page design contains two widgets with disease/target evidence based on Uniprot and ClinVar evidence. The data should be pulled out from the current evidence table, however the curr…
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The ClinVar whitelist option (default = true) will set all P/LP 2*+ variants found in a VCF file to have a score of 1.0.
The issue with this is that, while it works well for pathogenic variants, it…
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Some of the links for ClinVar are broken. For example, for uniprot id P03372 the ClinVar links that appear in the tooltips in the Variants track don't work. It looks like the `href` of the links is no…
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Hey
I run command and get some info about missing "clinvar_clnsig" column":
`python3 tapes.py sort -i test.VEP.vcf -o vepout.txt --tab`
***TAPES: SORT***
> 2021-07-14 10:28…
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Clinvar is a public resource for information on human genetic variants. The FTP site is here: ftp://ftp.ncbi.nlm.nih.gov/pub/clinvar/, example variant record is here: https://www.ncbi.nlm.nih.gov/cli…