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- [X] Additional function parameters / changed functionality / changed defaults?
Could you add functionality to allow for clustering of both the columns and the rows of the stacked violin plot …
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Hello,
Is it possible to add labels to the dendrogram `single_linkage_tree_.plot` produces? The labels would come from the distance matrix used for clustering.
Thanks
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First off, thank you so much for creating this package. I've been needing something like this and wrote a wrapper with rpy2 but will use this instead from now on.
I am noticing some inconsistenci…
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I'm reporting 3 different representations for my clustering: colored dendrogram, PCA scatterplot and silhouette thanks to fviz_cluster, fviz_dend and fviz_silhouette respectively. I'm facing the follo…
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Currently the Dash clustergram is restricted to clustering based on all row or column values. There are cases where I would like to sort my data based on a chosen metadata category, and then cluster …
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Before I say anything I am impressed by the dedication into the modules you guys are creating.
ML in JavaScript is in it's infancy it seems as there are no libraries that provide agglomerative hierar…
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We commonly would like to be able to investigate which haplotypes carry which mutations, particularly non-synonymous SNPs and CNVs. This is usually in the context of investigating a locus under recent…
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Version (Anaconda): drep 3.5.0 pyhdfd78af_0 bioconda
First of all, thanks for your work, dRep has been very useful in my work.
One thing that could be improv…
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Hello,
thanks for this nice tool. I have been using it for the last two months extensively.
I was using heatmap function to plot a similarity matrix between Chip-seq samples coming from deepTools…
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**Is your feature request related to a problem? Please describe.**
Clustergrammer2 can visualize matrices with ~10 million matrix cells, but slows down when there are too many columns or rows (>20,00…