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Hi
That's a great method! I'm wondering if, without the reference data and positive/negative markers (I only have the DAPI image and transcripts.csv), this method is still viable for cell segmentati…
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All gRPC stuff.
Taken from dashmoney.io by overriding `fetch` with a logger middleware in the dev console:
```js
var __fetch__ = fetch;
globalThis.fetch = function (...args) {
console.log…
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I have encountered an error during training bidcell model with a stereoseq dataset.
```
In [46]: model.train()
2024-08-23 15:18:44,725 INFO Initialising model
Number of genes: 515
2024-08-23 15…
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**Describe the bug**
Clicking on Visual Components tab leads to error
**To Reproduce**
Open the "Org Check" click on "Visual Components" tab, --> the error is thrown.
**Additional details**
R…
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As an example, if the `background` value in the marker sheet points to multiple channels (pointing is done by matching to the `marker_name` value), the `scalar` critical for the subtraction calculatio…
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Hi,
I manaaged to register the DAPI image from a xenium output and with an HE stained image of the same slide. However, I am having issues warping my cell centroid xy coordinates and the transcript…
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# Widefield Super-resolution (GAN - DAPI)
Bioimage.io -- an AI model repository for deep learning.
[https://bioimage.io/?tags=deepimagej%2FWidefieldDapiSuperResolution&id=deepimagej%2Fwidefielddapis…
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Thanks for this amazing tool!
## Description
I have an sdata object with more than one image (MERSCOPE data with 7 z slices), and I used Baysor trough the sopa pipeline for segmentation. When run…
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##### Description
I'm trying to figure out how to use the `-Dapis` flag to filter the api paths being generated, but I can't seem to figure it out. And it's not documented with the other examples i…
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- [x] Create DIP9/DIP13 key for identity
- [x] Create the other 5 keys for an identity
- [x] Create AssetLock Tx
- [x] Broadcast via Tx
- [ ] Create AssetLockProof \
(`txoutproof` for bloc…