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This is a file with lookup data for the aDNA pilot project data ingestion.
[adna_pilot_lookup_import_oct_2024.xlsx](https://github.com/user-attachments/files/17056511/adna_pilot_lookup_import_oct_2…
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**Describe the bug**
After the ingestion 1.8T of data we lost 9 documents.
We log every response from quickwit during ingestion. And we see in logs
```
{"num_docs_for_processing":7000} #247545 ti…
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This is a file with new lookup data necessary for ingestion of Lund dendrochronology data for autumn 2024.
[dendro_lookup_import_oct_2024.xlsx](https://github.com/user-attachments/files/17055283/d…
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Steps to reproduce:
1. Create a collection
2. Link 2 data sources to it.
Excepted Behaviour:
- when one of the data sources has completed ingestion, its status changes to COMPLETED
Observed…
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**Is your feature request related to a problem? Please describe.**
When ingesting sample data from Hive tables using Trino, we encounter an error: "Error trying to ingest sample data for table" when …
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swap data from local file ingestion to database connection and query.
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### SDAP data ingestion updates
With SDAP in a deployable state, we need to document and inform users how to add data to it for the time series query.
### Acceptance Criteria
*Acceptance criteria re…
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| short-variants | copy-number-alterations | rearrangements
-- | -- | -- | --
ORD-0000001-01.xml | Y | Y |
ORD-0000002-01.xml | Y | |
ORD-0000003-01.xml | Y…
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- Automation workflows (prefect-- own container running in the env; specify workflows for the data handling)