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Hello,
How does DIA-NN 1.9.2 switch from “Fragment.Quant.Raw” to “Precursor.Quantity” in the "report.tsv"?
With the old version of DIA-NN, it added the 3 most intense fragments. With 1.9.2, I d…
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Hi,
How would one process DIA data in DIA-NN from a digested lysate spiked with Heavy Lys and Arg 13C and 15N labeled protein standards?
Thanks,
Stoyan
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Hi,
I have the same error with this #1684. It seems like it was fixed. Please let me know what I should do to avoid this error.
```
java.lang.ArrayIndexOutOfBoundsException: Index 0 out of bounds f…
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Hello. I am new to DIA-NN. Can I modify the fixed modification on C to Methylthio[C](45.987721) in the Windows interface? or must switch to Linux?
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Hi Bo and Colleagues!
May I ask you to please add a license for Carafe, if that's OK? We would love to test integration into DIA-NN!
Best,
Vadim
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Hi, I did phospho analysis in Fragpipe-DIA-NN.
I see one strange thing in output file. I see that for …
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Hi there,
I'm trying to run 4x phospho enriched and 4x global samples in DIA-NN (1.8.2 beta 39) but i am not sure if DIA-NN is bugged or if its still searching and taking a long time.
From what …
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Hi
We ran DIA_spec_diaPASEF workflow and DIA NN output protein group files does not have protein name. However, if i run DIA NN without using FragP
[PG_output.xlsx](https://github.com/user-attachme…
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Hi everyone,
I am trying to import a DIA-NN .tsv output file in the LFQbench R package, but I always receive an error when generating reports in the LFQbench format (Must extract column with a sing…
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Hi,
I'm trying to run DIA-NN on PXD026600 wide window data set with only FASTA input and set the Precursor FDR (%) to 100 as I don't want any filtering. The rest of the parameters are default.
…