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**Background**
Issue #4 added Lambda support to the `hubverse_transform` Python package.
Those changes added a way to package and deploy `hubverse_transform` to the `hubverse-transform-model-output…
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In the hubEnsembles manuscript, we have a plot of quantile average and linear pool ensembles from the incident example data (Figure 5), where the median values are used as the point estimate. However,…
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**Background**
The script addon.py already have functions for preprocessing, normalization, clustering, cell type prediction, gene list for cells/tissues, gene expression per cell types, DEG per tiss…
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### Summary
Create a unified data model for disease knowledge. There is a wealth of information that can be associated with any disease: what phenotypes are manifested, the causative variants and t…
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this issue is for bringing attention to specific search features or strategies that we want to incorporate into our search interface (for both the variant-centric and VTB views), to drive our data mod…
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**Background**
This is related to (and a pre-requisite for) Infectious-Disease-Modeling-Hubs/hubverse-transform#6
The [hubverse-transform repo ](https://github.com/Infectious-Disease-Modeling-Hubs/h…
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Working and v1.0.0 I noticed that the schema for `sample` `value` `minimum` and `maximum` properties only has a description with no type or other specification.
https://github.com/Infectious-Disea…
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Creating this ticket to begin collecting requirements and considerations for modeling "Genetic Conditions". This is the name we have given to the concept of "A disease or set of one or more co-occur…
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I have a question about modeling using OGMS and individuation of dispositions.
I will take achondroplasia (causative gene FGFR3) as an example, but for purposes here any disease whose underlying pa…
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Values in a number of synthetic model output files contain decimals when they should all be integers (or atleast coercible to inegers without changing the values) e.g. https://github.com/Infectious-Di…