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User can press a key, say `r` and VolView activates the Rectangle tool. Implement for all tools in ToolBar. Keys should be configurable.
Try to follow HistomicsUI.
> o, r, i, c, p, l, b: Switch …
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I'm not sure where this should go, but there should be a way to mark a slide as "Done" and another way to mark it as "Reviewed". For groups working on a project, each person might be assigned a set of…
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[0m[1mWARNING [274890450752] Unable to open X display. Disabling visualization.[0m
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-root'
Traceback (most recent call last):
…
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Hi there,
Ive found openslide to be quite problematic when dealing with high mag WSIs. Your code can be upgraded to use tifffile, which would eliminate the image size limitations of your system. I…
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# histomicstk vesion: 1.3.8
### The function in _histomicstk.features.compute_nuclei_features_:
```
def process_nucleus(nprop, im_nuclei_bool):
for nprop in nuclei_props:
row = {
…
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![image](https://github.com/DigitalSlideArchive/HistomicsTK/assets/7254581/87d49fa8-b266-406d-a2aa-e4bc6bf69ade)
[predict_nuclei_multiple-118519_err.txt](https://github.com/user-attachments/files/159…
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@zachmullen @danlamanna
[worker.format.converter_path](https://github.com/girder/girder_worker/blob/master/girder_worker/format/__init__.py#L95-L113) raises NetworkXNoPath but does not specify sourc…
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large_image_wheels links page does not contain wheels for any versions of histomicstk, which was the only easy way to install histomicstk. Could you provide another source for wheels?
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It is useful to know who is using scikit-image when planning funding proposals. I was looking a little into how one can extract information such as that presented in [GitHub's dependents view](https:/…
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Hi, thank you for the great method! I try to apply it to my Visium dataset but I got the following warnings for all my samples on conversion step:
`
[2021-12-29 13:40:49,020] ℹ : Running xfuse vers…