-
Extend the FileServer class and add a new class that will serve the Kinase Library matrices.
The new class should process the raw matrices, and convert them to probability values for each kinase, …
-
I added the file curated_kinase_IDs.txt to dropbox/ALL_PTM_SITES. You should be able to map some unidentified kinases to their symbols. Let me know how many unmapped kinases remain after converting vi…
-
While going through some of the talktorials on the website, I came across 3D kinase views that are not correctly oriented (as in centered on kinase binding site, see [example](https://klifs.net/faq.ph…
-
this term will violate your new rule, re modifier and molecular function regulator,
butt I think we should get rid of this because it is kinase+ substrate, but covers a number of unrelated kina…
-
GO:0004697 diacylglycerol-dependent serine/threonine kinase activity - we don't plan to obsolete this term, but we'd like to make is a 'do not annotate'
-
7 sentences come up in WS252 descriptions as having an 'human ,' as the first ortholog.
Eg. 1: hlh-1 is an ortholog of human , MYF6 (myogenic factor 6 (herculin)),.....
Eg. 2: mlk-1 is an ortholog of…
-
We need to check how well ChEMBL annotates mutations. Mutant information can be found in the columns `Assay Variant Mutation` and `Assay Variant Accession`.
Example data point:
https://www.ebi.a…
-
* **GO term ID and label for which you request a new superclass**
GO:0005675 transcription factor TFIIH holo complex
* **New superclass (parent) suggested**
GO:0019907 cyclin-dependent protei…
-
GO:0004698 calcium-dependent protein kinase C activity
GO:0009931 calcium-dependent protein serine/threonine kinase activity
GO:0010857 calcium-dependent protein kinase activity
all mean the same…
-
Hello,
I am a Postdoctoral researcher working in Angus Nairn’s lab, Department of Psychiatry, Yale University. We used a proximity labelling proteomics approach to identify the protein interactome of…