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Thank you for developing this useful platform. I'm confused about the fold-change analysis using the example data "human_cachexia.csv", as it shows a totally different results with the tutoria.
He…
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Hi,
I'm trying to use metaboanalyst, but I'm encountering a problem in the data file loading. I have a csv file with samples in rows and predictors in column. When I use the Read.TextData I get the…
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I used install.packages("lilikoi") but it gives me always this:
Warning in install.packages :
package ‘lilikoi’ is not available (for R version 4.0.0)
and while using this devtools::install_git…
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Hello,
I'm running `MetaboAnalystR 4.0.0` on R 4.3.1 in RStudio 2023.06.0 Build 421 and I don't know how to plot any figures. The code lines `mSet temp ### Download data
> dl1 File downloaded:
…
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Hi
I was wondering if you can share some functions in R to access HMDB, SMPDB, ChemFont? Do you access these dbs through an API?
Thank you in advance
Kristina
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Hello,
I have followed you impressive pipeline (which I understood is within QC) successfully, but I wanted to move further into the multivariate side of metabolomics for actual interpretation.
Cou…
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Hi,
I am trying to use the MetaboAnalystR package functions within an R Markdown file to easily create metabolomics reports using the code provided by MetaboAnalyst when you use the website for in…
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Hi all,
Thanks for your amazing package!
I am doing an enrichment analysis using MetaboAnalystR v4.0.0.
I am using metabolites' Kegg Ids.
This is my code:
```
mSet
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Good day @Zhiqiang-PANG
I just installed the latest version of the tool and after trying the Integrated pathway tutorial - I seem to be getting this error.
```
mSet
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**Is your feature request related to a problem? Please describe.**
Current summaries are bare-bones providing results with little text to inform the user of what the plots represent. While some users…