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* **InterPro ID / label**
IPR024629
* **Example sequences with problematic annotation (ID + gene/protein name):**
* **Description of issue**
DNA strand exchange activity
DNA recombinat…
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Dear community,
Thanks for developing this tool!
I am applying both mgatk and maegatk on my own MAESTER dataset.
It goes well with mgatk tenx mode but doesnt give any output from maegatk for m…
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Hi, thanks for all your hard work, sorry if this information is somewhere I missed.
Does the assembly to be used for re-sequencing analysis have any decoy sequences like Epstein Barr or common bact…
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Hello! One of my genomes with a recent whole-genome duplication in the sunflower family (notoriously repeat-rich) has spent 26 days so far in the straining step, making it to round 8. Unfortunately, t…
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I'm using SOAPdenovo-fusion and SOAPdenovo-127mer to scaffold some mitochondrial contigs assembled by MEGAHIT, but a problem is that the scaffolding was frozen in mapping sequences for over 7 hours, w…
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Hello, My config contains the following lines:
```
GENETIC_CODE_TABLE=1
GENETIC_CODE_TABLENAME=Standard
MITO_GENETIC_CODE_TABLE=2
MITO_GENETIC_CODE_TABLENAME=Vertebrate Mitochondrial
PARENT_DI…
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Hi,
thank you for the very interesting tool!
I am writing since I met the following error after running
> python numt_parser.py --mt-fasta /data/hg38/chrM.fasta --numt-fasta /data/hg38/numtS_h…
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Hello,
We are running FCS on a set of genomes before submission to NCBI. We use the following command:
```
python3 fcs.py --image {fcs_img} screen genome --fasta {input.asm_fasta} --gx-db {par…
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Thank you for developing such a useful tool as PMAT. I encountered a problem while using it. I am trying to assemble the mitochondrial genome of Adiantum capillus-veneris. I downloaded one of the PacB…
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Some PLOS-ONE examples of toolkits/packages/workflows.
HemI: A Toolkit for Illustrating Heatmaps: https://doi.org/10.1371/journal.pone.0111988
Interpreting blood GLUcose data with R package iglu…