voutcn megahit issues - Githubissues

voutcn / megahit

Ultra-fast and memory-efficient (meta-)genome assembler

http://www.ncbi.nlm.nih.gov/pubmed/25609793

GNU General Public License v3.0

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issues

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Megahit not running [Errno 2]

#378 mrxuzj opened 2 months ago
0
different -t ，different result

#377 Dongdong-Chen opened 2 months ago
0
clarification on --continue

#376 willboulton opened 3 months ago
0
aarch64/arm64 support

#375 jianshu93 opened 4 months ago
0
Setting parameters for Megahit

#374 Rose1904 opened 4 months ago
0
exit code -6

#373 2061574124 opened 4 months ago
2
help to find megahit code that uses GPU

#372 natarivera33 opened 5 months ago
0
Multiple paired end fasta file question

#371 g-raymo opened 5 months ago
0
What is the full name of multi？

#370 liuxue-123 opened 6 months ago
3
Create LC1.6

#369 ramavchar closed 6 months ago
0
Add support for non-x86_64 architectures (e.g. Linux ARM64)

#368 martin-g opened 8 months ago
0
BUG: Unable to set kmer size

#367 haogecat opened 8 months ago
0
Fix `gcc-13` build failure (missing `<cstdint>` include)

#366 trofi opened 9 months ago
0
Illumina SE

#365 nicolo-tellini opened 10 months ago
1
Merge simple edges in the assembly graph?

#364 schorlton opened 12 months ago
1
Error: Exit code -7

#363 MoriatyZy opened 1 year ago
0
Is there a default for the --preset option?

#362 jolespin opened 1 year ago
0
How to tell what the "peak memory" or "maximum memory needed" would be for a job based on the log?

#361 jolespin opened 1 year ago
0
Add PIGZ

#360 gariem closed 1 year ago
0
MEGAHIT output: scaffolds

#359 tvtv195 opened 1 year ago
3
Megahit running for almost a month now

#358 OluchiAroh opened 1 year ago
0
How to solve memory shortages?

#357 xfk274280 opened 1 year ago
0
Running into a permission error while running a test data

#356 marynjerey opened 1 year ago
1
Exit code 1

#355 xsq2022 opened 1 year ago
0
Exit Code -6

#354 GJPaul opened 1 year ago
0
Will circular DNA be reported?

#353 ZeweiSong opened 1 year ago
3
== Error == system call for: "['']" finished abnormally, OS return value: 2

#352 MaxBai0123 opened 1 year ago
0
Hi~I got this error: 'Exit code -9'

#351 MaxBai0123 opened 1 year ago
3
Adds an interactive Jupyter notebook example

#350 lebovic closed 1 year ago
2
use available processor for process not all on host

#349 EricDeveaud closed 1 year ago
0
Stuck with exit code 1 for a while please help

#348 Sabrin2020 closed 1 year ago
2
Ubuntu WSL and Open-Suse server megahit_core read2sdbg

#347 feeka opened 1 year ago
0
Usage on Mac - megahit_core read2sdbg

#346 feeka opened 1 year ago
0
Assembly contiguity & sequencing depth

#345 TymekPieszko opened 1 year ago
0
Error with latest OS X Bioconda recipe

#344 vinisalazar opened 2 years ago
1
Problem with big assembly

#343 ElsaMMendes closed 1 year ago
1
Update README.md

#342 rekado closed 2 years ago
0
When I run the command, Megahit can only recognize one fq file, what happens

#341 chenyu-11 closed 2 years ago
0
I set 560 threads,but i got this log.

#340 WJT0925 opened 2 years ago
0
ID in header

#339 Biofarmer opened 2 years ago
0
number of cpus//threads

#338 EricDeveaud closed 1 year ago
2
Exit code -15

#337 Menggong-li opened 2 years ago
0
Question: how megahit deals with different size read sets?

#336 Valentin-Bio-zz opened 2 years ago
0
Exit code 9.

#335 schrad910 opened 2 years ago
1
Which minimum kmer is supposed to be used on the 701G merged single-end .fa reads?

#334 B-1991-ing opened 2 years ago
1
[All datasets] Suspicious report of identical # unitigs disconnected in graph pruning

#333 GabeAl opened 2 years ago
0
Can we use megahit to assemble rna-seq data?

#332 xiekunwhy opened 2 years ago
2
Exit code 6 when assembling kmers

#331 hbbshulman opened 2 years ago
1
Graviton2-b

#330 accopeland opened 2 years ago
3
Minimum changes to compile on graviton2 (no bmi2, no popcnt)

#329 accopeland closed 2 years ago
1