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Hi @FreekManders and everyone,
Is there a way to use MutationalPatterns to get the SNVs correspond to a specific mutational signature?
I assume that the absolute contribution means the number of…
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- For BINARY (e.g. mutational signatures), we can do Fisher’s exact test and render the data similar to Mutations.
. I generated the freq/Count of a number of selecte…
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Hello! I find this tool incredibly useful. Just one possible enhancement could be to report the upstream and downstream bases (context) of the mutation to make it easier to make mutational signatures …
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Hello,
I am trying SUITOR to extract signatures from cancer mutational catalogs. However, the "rec" object that is created after running the suitor() function, does not have any information on the W …
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The idea is to build a classification algorithm for languages based on the frequency of occurence of a given charfacter set. These would work similar than mutational signatures.
The idea is to downlo…
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Hi there!
I've been interested in estimating the contribution of mutational signatures defined originally with whole-genome data to variant calls from panels such as MSK-IMPACT ; I wonder what the…
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Can you please curate this study?
http://www.nature.com/ng/journal/v48/n10/full/ng.3659.html