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貼吧活動:(請查閱 [SARS-CoV-2 Timeline by 2020.02.21](https://github.com/agorahub/_meta/blob/agoran/theagora/sari/Memorandum_2020-02-21_SARS-CoV-2-Timeline_Nathan.pdf?raw=true), by Nathan :cloud: )
- Colla…
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I'm so glad to find your great software NEOPREDPIPE to predict tumor neoantigens easliy. However, I got an error when running the NeoPredPipe,the bug shows as following .I have checked my reformat fas…
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Your Wildtype and Frameshift plug-ins are very useful. Have you considered also making a plug-in for mutations on splice site regions?
Thanks
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MOAlmanac is a cancer variant knowledgebase from BROAD/Dana-Farber with 820 assertions.
The API documentation is here: https://app.swaggerhub.com/apis-docs/vanallenlab/almanac-browser/0.2#/
Con…
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https://mp.weixin.qq.com/s/ncWZ_MkI3TK7S43GN8L-MQ
ixxmu updated
2 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/tangshao2016/neoantigenR
Confirm the following by…
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Dear developers,
Thank you very much for the useful tool. I built Python2.7 with conda, and configure the 'usr_path.ini' file for my environment.
Then I run `python NeoPredPipe.py -I ./Example/i…
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Hi:
I developed a perl script [NeoPredPipe.install.pl](https://github.com/wangshun1121/NeoPredPipe/blob/master/NeoPredPipe.install.pl) to deploy latest NeoPredPipe, using following command:
```…
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Run the test data as the flowing:
**step1**
python main_netMHCpan_pipe.py --preponly -I ./Example/input_vcfs -H ./Example/HLAtypes/hlatypes.txt -o ./ -n TestRun -c 1 2 -E 8 9 10
INFO: Annovar r…
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Hello,
I run NeoPredPipe using the data in the Example directory with the flowing command:
python main_netMHCpan_pipe.py -I ./Example/input_vcfs -H ./Example/HLAtypes/hlatypes.txt -o ./ -n TestRun…