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Dear all,
Could you please register following brain regions in SAND/EBRAINS KG?
Area 25a (sACC)
Area 25p (sACC)
Area p24a (pACC)
Area p24b (pACC)
Area pd24cd (pACC)
Area pd24cv (pACC)
Area p…
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I was playing around with the different parcellations and noticed that the Glasser2016 parcellation is transformed inaccurately.
![image](https://user-images.githubusercontent.com/64432154/99133904…
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As discussed with @binarybottle, a potential project could explore the impact of uncertainty in anatomical labeling. This comparison could roughly be laid out as follows:
- Objective: characterize …
gkiar updated
3 years ago
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Hi all! I executed the SWM parcellation on a tractogram in MNI space with 15 points per fiber, using the following command:
> ProjectAtlasGeoLab -i /media/fibras/DATA/subjectHCP/3Msift_15p_sv_MNI.b…
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https://scalablebrainatlas.incf.org/rat/PLCJB14?acr=Cerebellum
Hooray! I finally found it. I think we can create an iframe that links directly to the SBA. Replacing `Cerebellum` with a [skos:prefLa…
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Hi,
Thank you for providing such well-documented scripts!
I have been running the scripts on my own dataset and would like to explore the correlation between gene expression and regional morphol…
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MRtrix3/mrtrix3#1935
Ideally provide a `-freesurfer` command-line option that can provide the location of FreeSurfer pre-generated outputs, e.g. from `fmriprep`, or run `recon_all` internally if ne…
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Parcellations is a great tool!
I'm wondering about how it handles spatial constraints-- when I use method='ward' and include a nifti mask object to constrain the clustering, how can I prevent getti…
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Related to #48
So that users can identify which templates are canonical, versus those that have been transformed in someway, it would be important to include this information. In an MVP, this ca…
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### What would you like to see added to HDMF?
When building extensions, users are often confused over how to define groups and datasets within a parent group. For example, one could define:
```
…
rly updated
10 months ago