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May `--cov-threshold` be enabled to be multiple integers separated by a comma (and _median_ coverage as another option)?
) are moving from sanger sequencing to HTS sequencing using a custom hybridisation probe panel which will be sequenced on either iSeq or NextSeq. I…
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## Description
- Illumina sequencing runs are not getting cleaned
- The cleaning relies on the timestamp of the sequencing folder (cleaning runs older than certain time)
- The timestamps of the fol…
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It looks like this set of analysis tools is set up for analyzing paired-end sequencing data. Is it also possible to analyze long read data (ONT, PacBio), which aren't in paired-end format?
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Hi @edsu7,
Can you please update the following to include a space after the semi-colon?
|Sepcimen Collector ID|Old value|New Value|
|-|-|-|
|SK_339227|Screening for Variants of Concern (VoC);In…
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Currently the SRM consumes events from BSSH in ICAv1. Since we switched to ICAv2 we no longer receive sequencing updates.
tasks:
- set up an ICAv2 ENS subscription for BSSH events
- create a Even…
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## patch-seq assay
Label: patch-seq assay
Alternative term(s): patch clamp and RNA sequencing assay
Definition: A single-cell RNA sequencing assay that takes a patch clamp recording from a cell a…
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Hi,
Thank you so much for your effort in developing and maintaining such a wonderful tool!
I am currently working on using WGS sequencing data for CNV calling, but I don’t have any normal samp…
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## Overview
The purpose of this issue/document is two-fold:
- to summarize the regressions analyses of the project in a **textual form**
- to summarize the results of these regression analyses in …