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### Your name
SU Yi
### Your affiliation
Fudan University
### What happened? What did you expect to happen?
The spin-up simulation almost stopped immediately after the log prints "* B e g i n T…
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I'm trying to update my snakemake workflow to v8+
My nuisance so far is the following. I submit my workflows as a job in the login node from where snakemake with the executor do their thing. Proble…
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Proposal:
- At the end of every data segment, save the training checkpoint file/directory name to a file, informing the scheduler (e.g., slurm or lsf) where to find the checkpoint.
- Save the model …
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[Dynamic Workload Scheduler](https://cloud.google.com/blog/products/compute/introducing-dynamic-workload-scheduler) is a resource management and job scheduling platform currently integrated into diffe…
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For performance reasons, results of `qstat` for Grind Engine and `squeue` for Slurm are cached for 5 seconds. It is fine for existing jobs, however, whenever a new job or batch of jobs is submitted to…
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Dear developers,
I am using Toil for running a pipeline in a HPC environment that uses Slurm for job scheduling.
Certain jobs of my pipeline are shorter than the others and it would be help me a lot …
ielis updated
3 months ago
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Thanks for this nice package
I want to run a command line tool with the following run command `mpiexec -n 4 tool_name inputfile` from a jupyter notebook on my workstation. Is executorlib the right …
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### Request
Currently, [process discovery](https://grafana.com/docs/alloy/latest/reference/components/discovery/discovery.process/) component attempts to get the container ID by [looking into the cgr…
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The "Inferring remaining multiple sequence alignments and gene trees" has been ended by our SLURM scheduler due to time limit. Only 6 jobs out of 35000 were still running. Is it possible to run them m…
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I am using snakemake 7.25.0 on a slurm cluster. I am trying to use a slurm profile:
```
jobs: 100
use-singularity: True
keep-going: True
rerun-incomplete: True
printshellcmds: True
max-jobs-p…