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get_unit_waveforms from https://github.com/SpikeInterface/spiketoolkit/blob/master/spiketoolkit/postprocessing/postprocessing_tools.py
is called many times, and if there were a way to optimize the …
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Hi Everyone,
A patch was recently released in [KS2.5](https://github.com/MouseLand/Kilosort/compare/kilosort25) and [KS3](https://github.com/MouseLand/Kilosort/commit/d2b5c27465dae22b861e2a5183b683…
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Hello,
So I am trying to get sortingview working for spikeinterface. However when I run the `kachery-cloud-init` I get the following error. Any advice would be greatly appreciated.
```
Tracebac…
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Hi @magland @jsoules
Related to https://github.com/flatironinstitute/kachery-cloud/issues/22, when generating a view in Jupyter and running it in a jupyter cell (aka `display(view)`), an error rel…
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Hello, apologies if this question is naive, but I am having a hard time understanding the purpose of the merging functions available for the spike interface analyzer objects. I am running mountainsort…
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For the case where you have a large dataset that needs to be run through multiple filteredViews before applying a final sortingBlock
Ex: 7000 events in a collection sorted by startDate->name, grouped…
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Would it be possible to add a very light vertical line in the waveform view (especially the view that does not use the electrode geometry) to indicate the detected peak of the waveform?
This would …
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This is my code. Imet a serious problem. I hope your help. When dealing different files, the number of units are the same. That's not right.
import os
from pprint import pprint
import tim…
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Hi, I am now focusing on "w2 = sw.plot_sorting_summary(we_KS2, display=False, curation=True, backend="sortingview")",I want to know which unit uses which color when plotting. I also add some print se…
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Hello, I have some new questions about the Kilosort4. Questions below are all based on Kilosort4.
The number of neurons detected across different organoids with default parameters is consistent acr…