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In formulas for GAM on occupancy ((lines [118-119](https://github.com/ToonVanDaele/trias-test/blob/master/R/5c_method_GAM_short.R#L118-L119) in `5c_method_GAM_short.R`)) I see you use `s(ncobs)` inste…
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http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2664.2008.01596.x/full
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### Email (Optional)
myless@mit.edu
### Version
0.5.3
### Which OS(es) are you using?
- [X] MacOS
- [ ] Windows
- [ ] Linux
### What happened?
1. I am trying to use generate_random_ordered_occu…
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Add mulitvariate normal for covariance between mean occupancy and detection. Check if the inverse Wishart distribution is still the best prior for a multi variant normal.
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Please check path to "splits" definition.
In this error, it is not clear what is meant by splits file.
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Based on 22fb59b973a1145646e333705d822f156218570b
@rBatt
Questions/thoughts:
1) Write out MSOM equations? Would help me differentiate Rhat_true from Rhat_obs.
2) Looks like MSOMs can mistakenly at…
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Dendropy seems to be really slow when working with the supertrees, if it is even working at all. I need to find a faster way to work with the supertrees that will let me check the list of taxa agains…
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E. guttolineata only occurs in the NCR (in VA but not north) and in Shenandoah but not in the rest of the range. Not sure how to handle this. E. longicauda, D. ochrophaeus, and G. porphyriticus may al…
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We removed the following transects from the dynamic occupancy model:
Removed in combine_obs_data.R, not included in covariate objects because no lat/lon
- "MRC2T1" - no lat/lon data
- "PR300" -…
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@peterdesmet has raised a need to be able to create counts by grids (e.g. UTM10 grid).
The specification he needs:
... peter to document soon
One idea would be to allow a UDF enabling:
```
SE…