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Very seminal work and detailed code for step 3 in your whole pipeline. However, codes for feature extraction and imaging data preprocessing are missing. For example, there is no description about how …
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Hello, @sophiajw!
Would it be possible to share the model and inference script to easily test and use the model?
I am developing an open-source platform called [FastPathology](https://github.com…
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### Moved from now deleted Discussion https://github.com/scikit-image/scikit-image/discussions/6065
Originally posted by **mkcor** November 26, 2021
Hello,
I'm starting this discussion as p…
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Hi, I'm having an issue where warpset is changing values at the lowest end of certain samples, making them a single (lower) value. What is the cause of this and how do I prevent it from happening?
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This issue is motivated by https://discourse.itk.org/t/itk-error-hematoxylin-and-eosin-are-getting-mixed-up-failed/4767/36
To be determined:
1. Should these images be produced always or only at th…
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Hi alexmomeni,
I am Tarek the co-author of StainGAN, thank you for re-implmenting the method and I hope you found it benficial.
One thing, Can you please cite the paper and the real repository o…
xtarx updated
5 years ago
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Hi,
Thanks for the excellent method for CITE-seq!
I find the vignettes from "https://cran.r-project.org/web/packages/dsb/vignettes/end_to_end_workflow.html" only deal with one sample.
If I have mul…
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Hi,
I am testing 2d .
the auto segmentation runs, but doesn't give any outputs (with default parameters) ... ?
Any ideas ?
thanks
antho
Nal44 updated
9 months ago
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Hi, apolgies if this isnt't the right place to post this. Also, just started using cytoflow (and python)
Is there a way of normalising data in cytoflow? i.e to correct for day-to-day variability i…
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这是我的配置文件：
# dataset paths
wsi_paths: /data2/longdan/datasets/naomo/kfb12023-11-21_07_00_45.svs
output_path: ./example/output/preprocessing
# basic setups
patch_size: 1024
patch_overlap: 6.25
…