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Providing an open source T2S model would be useful, to read all those long documents and textbooks without straining the eyes!
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Similar to #60.
Strain taxon ID for _Schizosaccharomyces japonicus_ in PANTHER is `402676`. IBA GAF generation should output `4897` instead.
Tagging @pgaudet
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In trying to run this notebook, I did the following steps:
1. Cloned the repo
2. Moved the files __init__.py, helper.py, and plot.py to the same directory as LearnLimoneneDynamics.ipynb
3. Rename…
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Environmental, socioeconomic, and health factors associated with gut microbiome species and strains in isolated Honduras villages – Shivkumar Vishnempet Shridhar – Cell
https://www.cell.com/cell-repo…
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### Feature description
Hello,
Currently the font size for the flow logs is not adjustable, and the default font size feels too small and is quite straining on the eyes. I think it should be adjus…
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Bacdive page for their strain:
https://bacdive.dsmz.de/strain/167709
bacdive.dsmz.debacdive.dsmz.de
[Roseimaritima multifibrata FF011L | Type strain | DSM 29513, LMG 29016 | BacDiveID:167709](htt…
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Hi,
In this result, should I select Predicted_Depth?
Strain_ID Strain_Name Cluster_ID Relative_Abundance_Inside_Cluster Predicted_Depth Coverage Covered/Total_kmr
Why is there no Predicted_Depth…
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Does anyone has opinions (and arguments) for or against using as native unit
* radians
* strain
* micro-strain
* nano-strain
* ...
As geophysicist I prefer physical units. Using radians also r…
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The `utils` function to convert strain interaction to cross immunity can produce some counterintuitive cross immunity matrix.
```
import numpy as np
from utils import strain_interaction_to_cross_…
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Hi,
I am able to run EarlGrey, however once I get to the TE Straining step, I get an error that the program can't locate the TE strainer scripts.
>
python: can't open file '/data/toby…