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[notes from original issue left behind in migration https://ucsc-cgl.atlassian.net/browse/ANVIL-19]
Denis is talking with someone at Galaxy (Chris?). The plan is that Dockstore is cleaning up our cod…
kozbo updated
4 years ago
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As a followup on my PR #1709, there were tools in workflows I could not attach the correct tool_shed_repository to:
Topic | Tutorial | Tutorial name | Tutorial file name | Tool name [Tool id] t…
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I am gettng error No module named Naked.toolshed.shell when running command "python2.7 test.py" Can you please help? Thanks.
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- [ ] tool_id toolshed.g2.bx.psu.edu/repos/iuc/bracken/est_abundance/2.9+galaxy0
- [ ] toolshed.g2.bx.psu.edu/repos/devteam/kraken_report/kraken-mpa-report/1.2.4
Braken pulls in Kraken indexes, bu…
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### 📝 Link summary of 2817 pages checked
| 🔍 Checked | ✅ Successful | 🚫 Errors |
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### About this issue
This i…
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At the Galaxy Admin meeting in Oslo @mvdbeek, @nsoranzo, @afgane and me discussed some ideas about the TS and how we can update/replace it. One major problem is the dependency on mercurial which we wa…
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There is a tool for loading images from the BIA into the Galaxy history: https://imaging.usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/bgruening/bia_download/bia_download/0.1.0+galaxy0
**T…
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Since I will give a workshop for this project at GCC and in general, it would be great to show what the advantages of this project are, that surpass bio.tools, toolshed, github repos and Galaxy instan…
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There are changes in this repo that have not been pushed to the toolshed. This will cause **wasted effort** on bug tracking and fixing when fixes have already been merged here, but not pushed out to t…