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As mentioned by @wtbarnes in #11 , we should properly define the scope of the project.
My current thinking is that the project should cover (copypasta from the current README):
* Creating a genera…
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This morning I am feeling very inspired by some work that @anastasiyaprymolenna , @sierra-moxon and others were doing last night. I'm talking about reviewing a [PR I made for simplifying ChemicalConve…
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### Description of the issue:
As we know, SMILES provides a standardized way to encode the 2D structure of chemical compounds like metabolites in a simple text format. This allows for easier storage,…
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Hello.
After inspecting the formatting of RFAA's structure prediction PDB files for (multi-ligand) protein-ligand complexes, it seems that the formatting for ligand (HETATM) atoms associated with e…
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This is a followup to a question that I asked in the last LinkML community meeting. I try to provide a concise description of the problem here. I know it's a lot to digest, so I totally understand if …
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Here we describe the process of creating a **[DictionaryName]DictionaryDescription.md** document, within which we will describe the contents of the individual dictionary (named in the title of this Is…
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### identificationID (property)
| | |
| ---- | ---- |
| **Definition** | An identifier for the Identification (the body of information associated with the assignment of a scientific name). May b…
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**Describe the problem you would like to solve**
Many journals assign each article an article number that is used in citations and other metadata -- often instead of page numbers. This data is not ca…
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From ENA:
At ENA we have also been receiving queries on how to register/declare replicate samples of the types or
Technical replicates: same sample across multiple conditions, e.g. same physical…
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The notes below are from a conversation with BASE who are trying to harvest from [our endpoint](https://enkore.toolforge.org/oai_pmh/?verb=ListRecords&metadataPrefix=oai_dc) to update [their represent…