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Hello,
I I am using the function `betadisper()` after `adonis()` to test for homogeneity of variances. I have used it a lot in the years but I never get to look at the boxplots output with the nec…
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https://mp.weixin.qq.com/s/7SnyLWD7Uh1ePrBuKOpoLQ
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Hello .. running adonis test on bray-curtis distance is enough to know if there is statistical difference using PCoA or Unifrac ordination?
so in the below example the p value is 0.002 in both cases …
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Hello
I am running adonis() permanova test on rarefied and non-rarefied data in phyloseq object.
But I didn't get significant statistical difference
I was wondering if beta diversity metrics c…
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hello .. I am not sure if these are bugs? please let me know
```
bray.pcoa
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Hello .. running adonis test on bray-curtis distance is enough to know if there is statistical difference using PCoA or Unifrac ordination?
so in the below example the p value is 0.002 in both cases…
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**Describe the bug**
In PCOA plots, the color of text with `geom_text_repel()` is currently set to the color of the points that are being labelled.
**To Reproduce**
Generate summaries of a study…
cleme updated
2 years ago
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If you don't mind I have a query if you can advice on
how can I add the p-value to the plot I produced using plot_ordination() function? for both cases of using adonis() and anosim()?
I attached …
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In *data import* section, mention that also these functions from mia package are available to import data from different formats. No example needed, just the name:
- makeTreeSummarizedExperimentFromD…
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Hi everyone!
I would like to know if exist any method to solve some doubts that I have as follow:
First, when I ran 'mFD::alpha.fd.multidim()', It appears a warning message saying:
> Error in …