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Hi
please can the definition for this term be revised:
SO:0000167 | promoter |
New definition:
A regulatory_region composed of the Transcription Start Site (TSS) and binding sites for TF_comple…
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**[Original report](https://bitbucket.org/pycogent3/cogent3-dev/issue/54) by GavinH (Bitbucket: [557058:e40c23e1-e273-4527-a2f8-5de5876e870d](https://bitbucket.org/557058:e40c23e1-e273-4527-a2f8-5de58…
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[R Markdown file](https://github.com/fish546-2018/yaamini-virginica/blob/master/analyses/2018-12-02-Gene-Enrichment-Analysis/2019-01-15-Proportion-Test.Rmd)
I characterized genomic locations for al…
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After chat with @pgaudet
Since these 4 terms have the comment
Comment
Note that as agreed during the transcription overhaul, terms specifying binding to specific transcription regulatory motifs …
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I just put the paper through
Webster et al 2019
RNA-binding proteins distinguish between similar sequence motifs to promote targeted deadenylation by Ccr4-Not
Originally published in elife h…
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https://www.pombase.org/gene/SPAC57A7.04c
update product to
"major poly(A) binding protein" (or similar)
and add processes from this review
Pab1, the major poly(A) binding protein of the y…
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## Bug report
### Expected behavior and actual behavior
Should submit jobs to LSF. Instead crashes after a while.
### Steps to reproduce the problem
Run a workflow with lsf as the executo…
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This does seem to have a role in regulating gene expression but I don't think it directly binds to promoter motifs:
mtf1 | mitochondrial RNA polymerase specificity factor, predicted rRNA methyltr…
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Hello,
I was trying to run preprocess step in which when i am running bam_cov.py and it is giving a key error 'HG19'
The command iam giving is bam_cov.py FLAG-MSI2_2_iCLIP.bam FLAG-MSI2_2.bw
th…
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The transcription working group has agreed that these terms are too specific under the transcription factor branch, and we propose to merge as indicated below:
- [x] GO:0003705 transcription facto…