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@cschu @gemygk
I would like to get your views on adding rules for BUSCO, running against the genome, final output files and running against the prepare output then creating an external metric based …
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One interesting feature with an explanatory ability is [shapelet extraction](http://alumni.cs.ucr.edu/~lexiangy/Shapelet/kdd2009shapelet.pdf).
Would maybe be interesting to implement within this pa…
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I'm seeing a difference between mikado-2.0rc4 and mikado-2.0rc6_* versions in relation to calling and exclusion of transcripts with retained introns.
I'm attaching a screenshot of this region http:…
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Hi @HajkD,
I keep getting this error in the filtering step just before usearch clustering.
Which file is failing to be parsed at this stage?
```
Input: /disk2/nguinkal/Zander_Project/pipelines/L…
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Annotations to 'GO:0052157 modulation by symbiont of microbe-associated molecular pattern-induced host innate immune response' are to gene products that get recognized by the host. This is not an acti…
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I see there are lots of papers proposing may alternative roles for rps3
https://www.uniprot.org/uniprot/P23396
but I don't believe them ;)
All of the DNA repair related ones i looked at are in…
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ntthal alignment does not show all matching bases as paired. I am unsure if the thermodynamic calculation considers the matched bases or not either.
After pulling master, `make clean` and `make`, …
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If I ssh to a remote host and start firefox, I see a kernel panic. I took [a video](https://photos.app.goo.gl/gSdGjfmyvFtKAeir8) to try and capture the message that very briefly appears on the screen…
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Hi Shujun,
I assembly a 335M diploid plant genome by Falcon-Unzip with 100x PacBio Sequel data, contig N50 9M. After using HiC data, I get chromosome-scale length genome with scaffold N50 32M.
…
baozg updated
5 years ago
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