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Apply combined transform to cropped .vtk files using greedy.
Could also propagate a few other useful files, like coords-AP.nii.gz, coords-PS.nii.gz, and coords-IO.nii.gz
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Hi thank you for sharing the code.
When I ran through the code, it seems the last bit of the codes not working for me.
It gave the following error, sr and sl seem not to have data.
Error using gif…
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### What version of fMRIPrep are you using?
20.1.0
### What kind of installation are you using? Containers (Singularity, Docker), or "bare-metal"?
Singularity
[snip irrelevant bits]
…
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### Description
Values in gifti data arrays can be stored in ROW MAJOR ORDER (x1, x2, x3, ..., x_n, y1, y2, ..., y_n, z1, z2, ..., z_n) or COLUMN MAJOR ORDER (x1, y1, z1, x2, y2, z2, ..., x_n, y_n,…
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## Resource info table
| | |
| :------------------ | :----------------------------…
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Below is a list of sMRIPrep outputs. All T1w files will likely be replace with T2w, since that's what `nirodents` primarily uses.
@eilidhmacnicol does this list look right?
- [x] t1w_preproc
…
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Thanks for making this available, great work!
**Is there the FC Matrixs with 3D coordinates of MNI space available?**
Maybe just like:
```
x y z node_label node_size
-39.5807 -5.71401 51.108…
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Hi Chris,
Surf-Ice seems to be having some trouble with a particular type of GIFTI surface ([left_subthalamic_nucleus.gii.txt](https://github.com/neurolabusc/surf-ice/files/4793374/left_subthalamic…
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The compilation instructions distributed by Gentoo Linux for `=afni-20.1.16` have recently stopped working, and we get the following [build.log](https://github.com/afni/afni/files/5354112/build.log).
…
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Any objection to moving this repo to the JuliaHealth organization?
cc: @Tokazama
cc: @simonster
cc: @notZaki
cc: @ViralBShah
See also: https://github.com/JuliaIO/DICOM.jl/issues/48