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One think that has been requested is to enhance the final_table.tsv file to include (apart from the columns it already includes), the NCBI Taxon ID for each ASV/OTU and the accession number of the seq…
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Exception:
…
shyim updated
6 years ago
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Hi,
I've followed the methods section in this paper:
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1299-7
To generate `diamond blastx` hits from short-read WGS data, and …
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Hello everyone, sorry for my silly trouble but could any one help me to get Diamond makedb Database?
I'm trying to use diamond to search against NR database to get taxonomic information. I want to ge…
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This API call is going to be dismissed and replaced by the [new `/dataset-info` API](#641). Meanwhile, I need to clarify the following bit, in order to provide a decent new implementation for legacy c…
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{
"id": "ea31320a-a797-47ef-ba00-acc42f990c79",
"type": "INDIVIDUAL",
"taxId": "75845870976",
"name": "Sophia Carvalho Lancini",
"email": "leandro.melo+dev47001397814@beetech.…
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```
The new PSI-MI TAB 2.6 should extend the current 2.5 with this 16
additional columns:
PSI-MI TAB 2.6
- expansion -> CV (spoke, matrix, none, bipartite)
- biological role A
- biological role B
- …
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command run:
transrate --threads 8 --assembly transcripts_CCDR_T0-output-v2-cdhitest --reference Oryza_sativa.IRGSP-1.0.cdna.all.fa
contig metrics are generated, but errors out when generating co…
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I tried to create the viral neighbors database by this line
**krakenuniq-download --db DB 'viral-neighbors' --rettype fasta -R --rsync**
I get the following output.
Downloading viral neigh…
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currently, it seems the spreadsheet view is only available for an element of a template.
I want to be able to define a 'record' linking several related Form Element and declare them as 'field header'…