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Our jump problems were built around jump-adapted algorithms. Jump-adapted algorithms step directly to the time of the jump. Our interface of `rate(u,p,t)` and `affect!(integrator)` took advantage of t…
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**26 June 2017**
My first deep learning models finished training today! For the first pass, I trained a regression model using the 2.2M fragments that were positive across both of the SuRE replicat…
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hey guys,
are you using the previous single interaction functions to build the interaction functions between uncertainties?
For example, in tree interaction with influ, we could just run influ_…
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# Models
We would simulate the following models
### ZINB
Parameters we want to vary are
1. W with K = 1, 2, and 3. Our first idea was to simulate W from a mixture of Gaussians. But, it is…
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# Introduction
Data growth [will be a major factor](http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005265#sec004) in the near future. However, most academic software in system…
0u812 updated
7 years ago
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Now interaction_clade_tree_phylm is functional but I still need to find a good way to summarize it. If we follow what happens in `tree`, we should give mean, CI_low and CI_high. But this leads to a lo…
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Hi, I am planning some particle tracking simulations of Lake Geneva. I am using MITgcm to do the simulations, and I have my hydrodynamic fields on an orthogonal curvilinear C-grid. I am thus forced to…
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control-1950 HighResMIP (page 4)
-What means BGM? Carbon cycle and biological processes are not considered in HighResMIP and are not included in the model components. A land-surface model is included…
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Hi!
When running Pizzly on this [RNA-seq data set](https://sourceforge.net/projects/fusioncatcher/files/test/) (using Ensembl annotation release 81) , which contains **only and only** the following…