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Hi.
Wonderful resource, thank you. I am wondering if you are considering a release with the 202 version of the GTDB database?
Thank you.
Anders.
Release available here: https://data.gtdb.…
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Parameters `MH_prime` and `MN_prime` should come as variables calculated on a training dataset, therefore they should be provided to `calculate_gmhi` as parameters, not calculated every time function …
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Homo sapiens are my number one species when looking at my kraken output despite running metaWRAP-Read_qc w/bmtagger for soil sediment samples taken from the ocean. I have double checked the path to my…
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Hi all,
I am using inStrain to analysis gut microbiome data. I created a SGRs by assembly, polishing and binning paired reads from one single sample. After mapping the same reads that I used for th…
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Hi Amy,
I'm in Rob Knight's lab and excited to see (and use) your DivNet package — congrats on the _in press_ acceptance! I have a question regarding the use of the covariate matrix ("X") in the di…
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Hello,
First off, thank you for the very descriptive tutorial on dada2, it is amazing.
I am currently faced with a weird error plot, which I don't quite understand, so any help or insight will b…
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| Name | Description | Size | Format | URL |
| --- | --- | --- | --- | --- |
| World Bank - Light Every Night | Light Every Night - World Bank Nightime Light Data – provides open access to all night…
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Greetings UBERON!
Following up on some conversations over the past month. Over at [ENVO](https://github.com/EnvironmentOntology/envo/), we're assisting the Earth Microbiome Project team ontologise …
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Hello ABySS team,
Thanks for the excellent tool-set! We (cc: @rob-p) intend to benchmark `abyss_bloom_dbg` for one of our lab tasks, and have some queries on which your input would be valuable.
…
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https://www.ebi.ac.uk/ols/ontologies/mondo/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FMONDO_0005052
Current definition
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Gastrointestinal symptoms characterized by chronic abdominal pain …