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It is pretty nasty to test w.r.t. scoping, but think we should give it a try in mlr, BatchJobs, etc.
Use case: function arguments given in a list-like structure + more arguments in the current enviro…
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Hallo @All,
I submitted a job in linux with the server working directory `/home//working`. This directory is available in Windows as `H:\working`.
If I load the registry in windows during the running…
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I am attempting to run a local workflow mirroring `run-PopSV-local.R` from the `scripts` folder. I am using a small sample of bam files to learn the package and make sure I can run everything. When ru…
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Hi Joey,
I started using phyloseq last November and am so glad to have the package for managing my microbial sequence data. Recently when I downloaded another package with various dependencies, I wa…
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Hi
I would like to install msnbase from github to use the new calculatefragment features.
I did
```
devtools::install_github("lgatto/MSnbase")
library(MSnbase)
```
I got:
```
> library(MSnbase) …
adder updated
9 years ago
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Hi @All,
On a windows PC with R 3.1.2 and BatchJobs 1.5 I get this message:
``` R
> showLog(reg, 1)
Error in as.character(x) :
cannot coerce type 'closure' to vector of type 'character'
```
This…
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When trying to reproduce results in the 2013 paper, from this code in [analysis_code.R](https://github.com/alyssafrazee/derfinder/blob/master/analysis_code.R) ...
```
# get the flags:
exons = getAnno…
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Maybe i am doing it wrong, but each time I want to check a rev check for details / problems the temp file dir where stuff was stored seems to geht deleted / cleaned up behind my back.
Eg:
Finished …
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attaching this `base` operator currently breaks e.g. the `BatchJobs` package
testing and identifying cause not done yet
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I don't recall ever seeing a method for safely/robustly removing an existing registry, i.e. a `removeRegistry()` function. The function should check if there registry is active/used/locked etc., befor…