issues
search
leekgroup
/
derfinder
R package for DER Finder, a method for differential expression analysis of RNA-seq data
http://biostatistics.oxfordjournals.org/content/early/2014/01/06/biostatistics.kxt053.short?rss=1
MIT License
22
stars
11
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Regions are not detected as expressed
#18
adomingues
opened
5 years ago
0
derfinder 1.7.16
#17
LiNk-NY
closed
7 years ago
2
Make Docker container for reproducing this analysis
#16
alyssafrazee
opened
9 years ago
1
makeTranscriptDbFromUCSC() returns "'data' must be of a vector type" error
#15
brianhigh
opened
9 years ago
0
More detailed installation instructions
#14
lcolladotor
opened
9 years ago
0
*cuff-UDPATED.rda files missing
#13
brianhigh
closed
9 years ago
2
exons length error from stopifnot() call in getFlags.R
#12
brianhigh
closed
9 years ago
3
package RSQLite.extfuns was removed from CRAN
#11
brianhigh
closed
9 years ago
1
makeDb error when running analysis_code.R
#10
brianhigh
closed
9 years ago
3
package locfdr was removed from CRAN
#9
brianhigh
closed
9 years ago
2
Where is tophatY-updated?
#8
brianhigh
closed
9 years ago
2
fix dependencies
#7
alyssafrazee
opened
10 years ago
1
Error in countReads.py
#6
samirwadhawan
closed
10 years ago
2
request to modify countReads.py to include strand specific information
#5
samirwadhawan
closed
10 years ago
3
Bug fixes
#4
lcolladotor
closed
11 years ago
0
Version 1.0.2 of derfinder.
#3
lcolladotor
closed
11 years ago
0
Updated the documentation to use roxygen2
#2
lcolladotor
closed
11 years ago
2
Reduced the number of times the column medians are calculated
#1
lcolladotor
closed
11 years ago
1