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**Describe the bug**
When using an invalid tool version id with the TRS, there's a 500
**To Reproduce**
Steps to reproduce the behavior:
1. Go to https://dockstore.org/api/api/ga4gh/v2/tools/%23workf…
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Below is the list of closed data resources genetics-v2g-data relies on:
```
gs://genetics-portal-input/pqtl_sun2018/raw_data/001_SOMALOGIC_GWAS_protein_info.csv
gs://genetics-portal-input/eqtl_gt…
forus updated
2 years ago
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Tools that could be added to the containers:
- MAGMA https://ctg.cncr.nl/software/magma
- Rpackage Genomic SEM https://github.com/GenomicSEM/GenomicSEM
- Rpackage Two Sample Mendelian Randomizatio…
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because of [Errno 24] Too many open files: '/u/project/pasaniuc/pasaniucdata/admixture/projects/admix-prs-uncertainty/experiments/02_simulation/submitit-logs/506017_0_result.pkl.save_tmp'
submitit ER…
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Hello,
I am working through the tutorial in the Nature Protocols paper "Detecting chromosomal interactions in Capture Hi-C data with CHiCAGO and companion tools" (https://www.nature.com/articles/s4…
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```
loading input file
split files
prepare input files of finemapping tools
run finemapping tools
gather results
wc: /content/drive/MyDrive/egg19/CAUSALdb-finemapping-pip/causaldb_input/causal…
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I think we should add a check that forces both BP columns to be integer before trying to merge.
Better yet, just add a check that always makes the input sumstats BP col an integer col.
From the …
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Dear simtrait maintainers,
A few months ago I was searching the literature for GWAS dataset simulators (such as simtrait) and I have a list of twenty of such tools. Today I stumbled upon simtrait b…
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Hello,
I would like to ask whether for a recombination rate adjustments it is necessary to use for example Gubbins before using pyseer or pyseer can take complete care of this issue.
Thank you i…
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https://mp.weixin.qq.com/s/Bd-ylUqEUyMw5U2uo9LtlQ
ixxmu updated
2 years ago