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Dear,
I am experiencing issues using the align.seqs command in mothur v 1.36.1 (compiled from source) while the same command runs flawlessly in v.1.35.1 on the same linux machine.
It appears to be …
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Hi,
I recently realized that if you run
jacc_dist
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Cytolysis terms
The following terms need to be added to or changed in the
GO. I apologize for the proliferation of synonyms.
Thanks,
Alex
1) GO:0019835 cytolysis
Synonym: lysis [<]
Propos…
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Hi! I am quite new to bioinformatic and I have difficulties to understand the meaning of the output of oecosimu. What mean the values of "statistics" , the different percentages and the "Pr (sim)"? I …
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Hi All,
Should the terms under Tissue development and its children get a taxon rule?
http://amigo.geneontology.org/amigo/term/GO:0009888
Thanks,
Rama
Reported by: rbalakri
Original Ticket: [geneont…
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Hi. I faced this issue using _classify.seqs_. It failed both with _wang_ and _knn_ methods (this latter even without _.taxonomy_ file output). As I had the _.taxonomy_ file for wang (mothur generated …
khyox updated
9 years ago
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Hi,
I would like to use UniFrac to find out if the microbial communities in my experiment are affected by treatment.
I have managed to calculate a UniFrac matrix (weighted and unweighted) and perfor…
JB-8 updated
10 years ago
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For 10.3389/fmicb.2014.00367,
oami_pmc_doi_import ends with
```
Traceback (most recent call last):
File "./oa-put", line 118, in
material_url)
File "/home/danielmietchen/open-access-media-im…
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Hi Joey,
I am trying to compare microbial communities across ~20 plant genotypes. I would like to compare the differences in OTUs for each pair-wise genotype comparison. Below are two ways in which I…
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I may be jumping the gun on this one a little bit and these questions may be answerable once you release the vignettes and Rmarkdowns associated with your "Waste not, want not" paper. If so, I look fo…